An accurate perception method for low contrast bright field microscopy in heterogeneous microenvironments

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dc.contributor.author Rajasekaran, Keshav
dc.contributor.author Samani, Ekta
dc.contributor.author Bollavaram, Manasa
dc.contributor.author Stewart, John
dc.contributor.author Banerjee, Ashis G.
dc.date.accessioned 2018-01-08T12:33:49Z
dc.date.available 2018-01-08T12:33:49Z
dc.date.issued 2017-12
dc.identifier.citation Rajasekaran, Keshav; Samani, Ekta; Bollavaram, Manasa; Stewart, John and Banerjee, Ashis G., "An accurate perception method for low contrast bright field microscopy in heterogeneous microenvironments", Applied Sciences, DOI: 10.3390/app7121327, vol. 7, no. 12, Dec. 2017. en_US
dc.identifier.issn 2076-3417
dc.identifier.issn 2076-3417
dc.identifier.uri http://dx.doi.org/10.3390/app7121327
dc.identifier.uri https://repository.iitgn.ac.in/handle/123456789/3353
dc.description.abstract Automated optical tweezers-based robotic manipulation of microscale objects requires real-time visual perception for estimating the states, i.e., positions and orientations, of the objects. Such visual perception is particularly challenging in heterogeneous environments comprising mixtures of biological and colloidal objects, such as cells and microspheres, when the popular imaging modality of low contrast bright field microscopy is used. In this paper, we present an accurate method to address this challenge. Our method combines many well-established image processing techniques such as blob detection, histogram equalization, erosion, and dilation with a convolutional neural network in a novel manner. We demonstrate the effectiveness of our processing pipeline in perceiving objects of both regular and irregular shapes in heterogeneous microenvironments of varying compositions. The neural network, in particular, helps in distinguishing the individual microspheres present in dense clusters.
dc.description.statementofresponsibility by Keshav Rajasekaran, Ekta Samani, Manasa Bollavaram, John Stewartand Ashis G. Banerjee
dc.format.extent vol. 7, no. 12
dc.language.iso en en_US
dc.publisher MDPI en_US
dc.subject bright field imaging en_US
dc.subject cell and microsphere perception en_US
dc.subject blob and feature detection en_US
dc.subject convolutional neural network en_US
dc.title An accurate perception method for low contrast bright field microscopy in heterogeneous microenvironments en_US
dc.type Article en_US
dc.relation.journal Applied Sciences


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